I have 100 amino acid residues which have phi and psi angle.These range from -180 to 180 degress.
I represented the frequencies of 100 residues in the form of a two dimentional array with the help of references.
I took a range of 10 degrees
like -180 t0 -170(total i have 36 for phi and 36 for psi angles) .For each phi and psi corresponding angles I counted to which square it falls and I incremented it.Now I got the frequencies of the amino acids which falls in a perticular angle(its like 36 rows and 36 colums ).Now I want to represent it in the graphical way.Like more freq in one color and less frequencies in light color.
I tried by installing GD module.but I am not successfull.
Can any body sujjest me how can I do graphical representation with perl
I represented the frequencies of 100 residues in the form of a two dimentional array with the help of references.
I took a range of 10 degrees
like -180 t0 -170(total i have 36 for phi and 36 for psi angles) .For each phi and psi corresponding angles I counted to which square it falls and I incremented it.Now I got the frequencies of the amino acids which falls in a perticular angle(its like 36 rows and 36 colums ).Now I want to represent it in the graphical way.Like more freq in one color and less frequencies in light color.
I tried by installing GD module.but I am not successfull.
Can any body sujjest me how can I do graphical representation with perl