In order to defragment these indexes, you will have to actually drop then rebuild (i.e. using DROP INDEX/CREATE INDEX). Remember to be sure what the exact index definition is, before you drop any, though. Also, as stated in another thread with the same problem, you will want to look into using SQL 2005 or even SQL 2008 Express.
If 2005 / 2008 express is not available, run sp_updatestats on the user databases that you have deleted history from then try the following on said user databases.
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