JohnLucania
Programmer
How do you parse the data (Seq.txt) into a table in mysql?
The txt data look like:
>AREDD7|Mus musculus|brain|45545|411|741
aagcggccggtctgcagtcggagacttgcaggcagcaaacacggtgcgaacgaaccggag
gggggagagagaaatcaaacagctaagcgtggagcagacggcctgggacccagaagggga
tcgatgcgaggagcgcaataata
>RTAAD|Bacteria|Pro|122|3212129|204340
aagcggccggtctgcagtcggagacttgcaggcagcaaacacggtgcgaacgaaccggag
gggggagagagaaatcaaacagctaagcgtggagcagacggcctgggacccagaagggga
tcgatgcgaggagcgcaataata
> bla........
aaagaga
>bla ........
There are 8 corresponding fields in the table. The first field is Auto-increment ID.
jl
The txt data look like:
>AREDD7|Mus musculus|brain|45545|411|741
aagcggccggtctgcagtcggagacttgcaggcagcaaacacggtgcgaacgaaccggag
gggggagagagaaatcaaacagctaagcgtggagcagacggcctgggacccagaagggga
tcgatgcgaggagcgcaataata
>RTAAD|Bacteria|Pro|122|3212129|204340
aagcggccggtctgcagtcggagacttgcaggcagcaaacacggtgcgaacgaaccggag
gggggagagagaaatcaaacagctaagcgtggagcagacggcctgggacccagaagggga
tcgatgcgaggagcgcaataata
> bla........
aaagaga
>bla ........
There are 8 corresponding fields in the table. The first field is Auto-increment ID.
jl