If you are going to use Pre-term you should run it in duct or conduit always
Perhaps we are not clear on the definition of preterminated, but neither the type of termination nor the time of termination should dictate whether the fiber is enclosed in a raceway.
You can order duplex 3mm fiber jumpers preterminated, you can also order tight buffer distribution fiber (900um jacket) preterminated and you can order breakout (3mm jackets within a cable jacket) fiber preterminated. If you are thinking about 3mm duplex patch cables, personally, i don't believe those have any place but in the closet between equipment and panel. If you are leaving the closet and going some where, you should be using fiber designed for that purpose.
The breakout fiber is plenty robust to be run by itself or with the copper cabling. However, the best solution is to protect it in a raceway. You just never know when someone will pull somethin across and burn it or damaage it in some other way. Placing it inside innerduct is affordable protection.
Again a personal preference, but smurf tube (ENT conduit) is so named for it's blue smurf color. It is a rated product for electrical applications, and as such it may show up carrying AC power through out your facility. The Riser-guard product from Carlon is listed for optical fiber/telecom applications and definately won't be confused with building power. It is available from 3/4 to 2" sizes and i'd guess you'll have no trouble find 1" available which is a good general size to have around.
If you have a plenum air handling space to run through, you should consider the Riser Guard product from Carlon for those area.
Always more than one way to accomplish things, depends on the need and the budget.
good luck!
Daron J. Wilson, RCDD
Solving 'Real World' problems