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- Users: akreibich07
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Extracting DNA sequences from GenBank files
Thank you Trojan and Annihilannic for the code, and to 3inen, I will look into that as a method....thank you. -akreibich07- akreibich07
- Post #14
- Forum: Perl
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Extracting DNA sequences from GenBank files
How would I go about doing that Annihilannic?- akreibich07
- Post #11
- Forum: Perl
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Extracting DNA sequences from GenBank files
This code is giving me the error message that the gene doesn't appear in the .txt file. So, the program is now working, but I'm inputting genes that I know are for sure in the text file....here is the file NC_001666.txt that I'm using to test it... Name: Zea mays FileName: NC_001666 Bases...- akreibich07
- Post #8
- Forum: Perl
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Extracting DNA sequences from GenBank files
Hi Trojan, I had one problem with your code, and I've been trying to fix it myself all morning, but can't figure it out. Could you have a look at it again? I know it has something to do with the $count variable for how many times the gene appears in a text file. I inputted this.... perl...- akreibich07
- Post #5
- Forum: Perl
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Extracting DNA sequences from GenBank files
Hi all, I'm a programmer who uses mainly Java, but have started a research project that involves a lot of data extraction from files. I was told that Perl would be best for this, but I am having a tough time getting started with it. Using Perl, I need to extract DNA bases from a GenBank file...- akreibich07
- Thread
- Replies: 14
- Forum: Perl
