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  1. perldoubt

    hash help please:

    Hi all, I am trying to parse information from multiple files for some feilds. My objective is to make a matrix out of those feilds. for exanple:I have 3 feilds with queryname,subject name and percent ID. I want to print in an excel sheet Qname1 Qname2 Subname1...
  2. perldoubt

    running external command in DOS

    Thats right. I used \\ to define path. /\did'nt work.
  3. perldoubt

    running external command in DOS

    Thanks Steve,That was perfect. storing assigning filenames to a string var is an excellent idea. IT's working now. Thanks a ton. Aparna
  4. perldoubt

    running external command in DOS

    No man, Its not working. look at this.. this command at DOS works well. bl2seq -p blastp -i gi_57652444_r3.faa -j gi_57652446_r2.faa -o pp.txt but when I write a script: XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX #!/usrlocal/bin/perl $command = "bl2seq -p bl astp -i gi_57652444_r3.faa -j...
  5. perldoubt

    running external command in DOS

    Hi, Please help me. I am tryinhg to run an external command on DOS using perl script. Backtics do not work. General syntax of the command is: bl2seq -p programname -i firstfilename -j secondfilename -o <outputfilenanme> which in my program is : C:\\xxx\\xxx\\xxx\\bl2seq\\bin\\bl2seq...

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